1 00:00:00,210 --> 00:00:01,890 - Hello, I'm Lindsay Turnbull 2 00:00:01,890 --> 00:00:04,860 and I teach biology at the University of Oxford. 3 00:00:04,860 --> 00:00:05,730 In this video, 4 00:00:05,730 --> 00:00:09,090 I want to tell you how cells process information. 5 00:00:09,090 --> 00:00:10,410 It's a crucial concept 6 00:00:10,410 --> 00:00:14,033 from chapter one of my new book, "Biology: The Whole Story". 7 00:00:14,033 --> 00:00:16,270 (birds chirping) 8 00:00:16,270 --> 00:00:19,740 (frogs croaking) 9 00:00:19,740 --> 00:00:22,680 All Life on Earth is made from cells. 10 00:00:22,680 --> 00:00:24,960 Indeed, most cells live alone 11 00:00:24,960 --> 00:00:27,750 and they're too small for us to really notice. 12 00:00:27,750 --> 00:00:29,340 But what we can't help noticing 13 00:00:29,340 --> 00:00:31,920 is all the larger beings that roam the Earth, 14 00:00:31,920 --> 00:00:34,110 and they too are made from cells. 15 00:00:34,110 --> 00:00:35,430 You and I, for example, 16 00:00:35,430 --> 00:00:38,580 are each made from around 37 trillion cells, 17 00:00:38,580 --> 00:00:41,400 which is a pretty mind-boggling number. 18 00:00:41,400 --> 00:00:43,530 And if we are going to function properly, 19 00:00:43,530 --> 00:00:45,330 then every single one of those cells 20 00:00:45,330 --> 00:00:48,930 needs to know exactly what it's supposed to be doing 21 00:00:48,930 --> 00:00:50,823 or we'll kind of fall apart. 22 00:00:51,690 --> 00:00:53,610 So how do cells know 23 00:00:53,610 --> 00:00:55,589 what it is they're supposed to be doing? 24 00:00:55,590 --> 00:00:58,920 Well, they have to make all the right tools and machinery 25 00:00:58,920 --> 00:01:00,900 and spare parts that they need. 26 00:01:00,900 --> 00:01:02,309 And in order to do that, 27 00:01:02,310 --> 00:01:04,920 they have to have the right information. 28 00:01:04,920 --> 00:01:06,420 So if we're going to understand 29 00:01:06,420 --> 00:01:08,940 this process of information flow in cells, 30 00:01:08,940 --> 00:01:11,190 then we're going to have to look inside them. 31 00:01:11,190 --> 00:01:13,200 And there are two real problems with doing that. 32 00:01:13,200 --> 00:01:15,600 The first is that cells are really tiny, 33 00:01:15,600 --> 00:01:19,710 but the second is that cells are fiendishly complicated. 34 00:01:19,710 --> 00:01:22,949 But the good news is that I can show you a diagram 35 00:01:22,950 --> 00:01:24,870 that's really very simple 36 00:01:24,870 --> 00:01:28,380 because it's just going to contain these core components 37 00:01:28,380 --> 00:01:30,243 that all cells have. 38 00:01:31,110 --> 00:01:34,080 Let's start by just putting on the outer membrane. 39 00:01:34,080 --> 00:01:36,210 That's important for all cells, because it means 40 00:01:36,210 --> 00:01:38,520 that they can keep all their components together 41 00:01:38,520 --> 00:01:40,619 and they won't just drift off. 42 00:01:40,620 --> 00:01:43,470 And now let's put these crucial things inside. 43 00:01:43,470 --> 00:01:46,800 So the very first thing that we're going to add is a genome, 44 00:01:46,800 --> 00:01:50,220 and that is a massive book of instructions. 45 00:01:50,220 --> 00:01:53,340 So all the information that the cell could possibly need 46 00:01:53,340 --> 00:01:55,623 is contained within this genome. 47 00:01:56,550 --> 00:01:58,259 The second thing are messages 48 00:01:58,260 --> 00:01:59,883 that are going to fly out of the genome 49 00:01:59,883 --> 00:02:03,122 that just carry individual instructions. 50 00:02:03,960 --> 00:02:06,570 The third thing are the cell's key workers, 51 00:02:06,570 --> 00:02:08,250 and they're called ribosomes. 52 00:02:08,250 --> 00:02:12,390 And their job is to trap these messages and read them, 53 00:02:12,390 --> 00:02:15,299 and they use the information contained in the message 54 00:02:15,300 --> 00:02:18,450 to build all of the tools, machinery, 55 00:02:18,450 --> 00:02:21,269 and the spare parts that the cell needs. 56 00:02:21,270 --> 00:02:24,300 So this, this set of things here 57 00:02:24,300 --> 00:02:27,540 is really central to the functioning of any cell on Earth. 58 00:02:27,540 --> 00:02:29,970 It doesn't matter whether that cell lives alone 59 00:02:29,970 --> 00:02:32,340 or whether it's part of a larger body. 60 00:02:32,340 --> 00:02:34,020 Let's take a closer look now 61 00:02:34,020 --> 00:02:38,460 at each of those four crucial components inside the cell. 62 00:02:38,460 --> 00:02:41,310 So the first thing we looked at was the genome. 63 00:02:41,310 --> 00:02:44,910 Now, the genome is made from a molecule called DNA. 64 00:02:44,910 --> 00:02:46,829 And like many molecules in cells, 65 00:02:46,830 --> 00:02:48,780 a long strand of DNA is formed 66 00:02:48,780 --> 00:02:51,690 by sticking together smaller molecules, 67 00:02:51,690 --> 00:02:53,910 in this case the DNA letters. 68 00:02:53,910 --> 00:02:56,190 Now, the DNA letters come in four kinds, 69 00:02:56,190 --> 00:02:58,470 the letters A, C, G, and T, 70 00:02:58,470 --> 00:03:00,960 and they can be stuck together in any order. 71 00:03:00,960 --> 00:03:03,480 And then we get this very long strand. 72 00:03:03,480 --> 00:03:07,709 So just how many letters do we need to build an organism? 73 00:03:07,710 --> 00:03:09,180 Well, if you want to build a bacterium, 74 00:03:09,180 --> 00:03:11,550 you're going to need around a million letters. 75 00:03:11,550 --> 00:03:14,490 This worm, probably gonna need a hundred times more. 76 00:03:14,490 --> 00:03:17,310 And if you wanna make a shark or a pigeon or a horse, 77 00:03:17,310 --> 00:03:20,313 then you're probably gonna need a billion letters and more. 78 00:03:21,240 --> 00:03:24,720 So we need that molecule to be enormously long, 79 00:03:24,720 --> 00:03:27,150 and that means it's got to be very stable. 80 00:03:27,150 --> 00:03:30,450 And that's why you get this classic double helix shape. 81 00:03:30,450 --> 00:03:32,970 So only one of the strands carries the information 82 00:03:32,970 --> 00:03:35,130 and the second strand is really there 83 00:03:35,130 --> 00:03:36,870 to support the first strand 84 00:03:36,870 --> 00:03:39,483 and make sure that the molecule is stable. 85 00:03:40,590 --> 00:03:43,230 The second thing we looked at was those little messages 86 00:03:43,230 --> 00:03:44,820 that were flying out of the genome 87 00:03:44,820 --> 00:03:46,950 just carrying a single instruction. 88 00:03:46,950 --> 00:03:48,510 And they're made from a different molecule, 89 00:03:48,510 --> 00:03:50,790 although it's very similar, it's called RNA, 90 00:03:50,790 --> 00:03:52,650 and it's also letters 91 00:03:52,650 --> 00:03:54,300 but it's got a slightly different alphabet. 92 00:03:54,300 --> 00:03:57,243 So it uses the letters A, C, G, and U. 93 00:03:58,140 --> 00:04:01,200 The third thing we looked at was those ribosomes. 94 00:04:01,200 --> 00:04:04,109 Now they're very large molecular machines. 95 00:04:04,110 --> 00:04:06,570 Now we've drawn them as sort of fat guys in braces, 96 00:04:06,570 --> 00:04:08,880 but of course that isn't really what they look like, 97 00:04:08,880 --> 00:04:12,393 and they're actually made from a type of RNA and protein. 98 00:04:13,290 --> 00:04:14,670 The fourth thing we looked at 99 00:04:14,670 --> 00:04:16,709 was actually all that machinery 100 00:04:16,709 --> 00:04:18,779 and all the tools that the cell was making. 101 00:04:18,779 --> 00:04:21,419 And they're not made from DNA or RNA, 102 00:04:21,420 --> 00:04:23,790 they're made from protein. 103 00:04:23,790 --> 00:04:27,180 Now, proteins are also made by sticking together 104 00:04:27,180 --> 00:04:30,600 lots of smaller molecules into a long chain. 105 00:04:30,600 --> 00:04:33,150 But those smaller molecules in this case 106 00:04:33,150 --> 00:04:35,700 are called amino acids. 107 00:04:35,700 --> 00:04:38,250 And once they've been stuck together into a chain, 108 00:04:38,250 --> 00:04:41,070 then the chain starts to fold and twist 109 00:04:41,070 --> 00:04:45,450 and bend itself into an exquisite shape. 110 00:04:45,450 --> 00:04:47,370 And the shape of the molecule 111 00:04:47,370 --> 00:04:49,620 then allows it to perform whatever function 112 00:04:49,620 --> 00:04:52,500 or job that it needs to around the cell. 113 00:04:52,500 --> 00:04:56,640 Okay, so proteins we said are the molecule of choice 114 00:04:56,640 --> 00:04:59,010 for making all of the machinery and the tools 115 00:04:59,010 --> 00:05:01,260 and spare parts that the cell needs. 116 00:05:01,260 --> 00:05:03,810 So how is it possible for just one molecule 117 00:05:03,810 --> 00:05:07,020 to make such an extraordinary array of shapes? 118 00:05:07,020 --> 00:05:09,330 You know, cells make some incredible things, 119 00:05:09,330 --> 00:05:11,550 not just crude tools. 120 00:05:11,550 --> 00:05:14,520 They make locks with perfectly fitting keys. 121 00:05:14,520 --> 00:05:17,130 They can make channels that they can put into the membrane 122 00:05:17,130 --> 00:05:20,580 which only certain molecules will be allowed to enter, 123 00:05:20,580 --> 00:05:23,820 and they can even make an amazing molecular turbine 124 00:05:23,820 --> 00:05:26,400 to generate all the energy that they need. 125 00:05:26,400 --> 00:05:28,440 So how can this one molecule protein 126 00:05:28,440 --> 00:05:30,600 make all of those shapes? 127 00:05:30,600 --> 00:05:33,090 Well, as we said, once the chain of amino acids 128 00:05:33,090 --> 00:05:35,099 is put together by the ribosome, 129 00:05:35,100 --> 00:05:38,400 it can twist and turn into an amazing shape. 130 00:05:38,400 --> 00:05:41,370 And because there are 20 different amino acids 131 00:05:41,370 --> 00:05:42,930 to choose from, 132 00:05:42,930 --> 00:05:46,440 that's why each chain can really be quite different. 133 00:05:46,440 --> 00:05:47,969 And those different amino acids 134 00:05:47,970 --> 00:05:49,320 have very different properties. 135 00:05:49,320 --> 00:05:51,390 So some of them attract each other 136 00:05:51,390 --> 00:05:53,400 and some of them repel each other. 137 00:05:53,400 --> 00:05:56,520 And that's why the chain can fold up and bend 138 00:05:56,520 --> 00:05:59,370 and twist in the way that it does. 139 00:05:59,370 --> 00:06:01,530 Now, what's absolutely crucial, of course, 140 00:06:01,530 --> 00:06:04,169 is that the amino acids are joined together 141 00:06:04,170 --> 00:06:06,030 in exactly the right sequence. 142 00:06:06,030 --> 00:06:07,590 If that doesn't happen, 143 00:06:07,590 --> 00:06:10,590 then the thing isn't going to function properly. 144 00:06:10,590 --> 00:06:12,719 So that's the job of the ribosome, 145 00:06:12,720 --> 00:06:15,780 is to make sure that it reads the message carefully 146 00:06:15,780 --> 00:06:17,640 and it puts the amino acids together 147 00:06:17,640 --> 00:06:19,919 in exactly the right sequence. 148 00:06:19,920 --> 00:06:22,650 And the way it does that is rather interesting. 149 00:06:22,650 --> 00:06:24,179 So when the message arrives, 150 00:06:24,180 --> 00:06:28,380 it's going to read the letters three letters at a time, 151 00:06:28,380 --> 00:06:31,050 and each of the three letters corresponds 152 00:06:31,050 --> 00:06:33,120 to a single amino acid. 153 00:06:33,120 --> 00:06:34,590 So by reading the three letters, 154 00:06:34,590 --> 00:06:37,859 it can decide which amino acids should I add next. 155 00:06:37,860 --> 00:06:42,420 For example, the three letters GGA tell the ribosome 156 00:06:42,420 --> 00:06:46,500 that the next amino acid to add to this chain is glycine. 157 00:06:46,500 --> 00:06:49,260 And what's truly incredible is that it wouldn't matter 158 00:06:49,260 --> 00:06:52,710 what cell you went into anywhere on Earth, 159 00:06:52,710 --> 00:06:55,289 if you gave it the letters GGA, 160 00:06:55,290 --> 00:06:57,750 the ribosomes in that cell would know 161 00:06:57,750 --> 00:07:00,390 to add the amino acid called glycine. 162 00:07:00,390 --> 00:07:03,659 And that's one of the reasons why we're very, very confident 163 00:07:03,660 --> 00:07:06,060 that all life on Earth is related 164 00:07:06,060 --> 00:07:09,030 and descended from a single common ancestor. 165 00:07:09,030 --> 00:07:12,299 So hopefully we can see now why this information 166 00:07:12,300 --> 00:07:16,140 is so crucial to the functioning of cells. 167 00:07:16,140 --> 00:07:18,390 They have to get the right information 168 00:07:18,390 --> 00:07:21,330 from the genome via the message 169 00:07:21,330 --> 00:07:24,479 so that the ribosomes can actually make the right protein, 170 00:07:24,480 --> 00:07:26,640 the one that's gonna work properly. 171 00:07:26,640 --> 00:07:28,469 So let's imagine that ribosomes 172 00:07:28,470 --> 00:07:30,450 can make some kind of hammer. 173 00:07:30,450 --> 00:07:32,130 In reality, cells make much more 174 00:07:32,130 --> 00:07:33,840 sophisticated things than hammers, 175 00:07:33,840 --> 00:07:36,780 but it's something we can think about. 176 00:07:36,780 --> 00:07:39,479 So the message comes out and they build the hammer. 177 00:07:39,480 --> 00:07:40,920 But in some cells, 178 00:07:40,920 --> 00:07:44,640 it might be that there's some slight change to that message. 179 00:07:44,640 --> 00:07:48,330 Perhaps one of the letters in the genome has been changed. 180 00:07:48,330 --> 00:07:52,169 And that does happen, and it's a process called mutation. 181 00:07:52,170 --> 00:07:54,870 So sometimes the letters can change from one into the other, 182 00:07:54,870 --> 00:07:57,420 an A might become a C, for example. 183 00:07:57,420 --> 00:08:01,080 Or sometimes a few letters get added or they're missing. 184 00:08:01,080 --> 00:08:03,539 And that means that the message that the ribosomes get 185 00:08:03,540 --> 00:08:05,250 is slightly different. 186 00:08:05,250 --> 00:08:07,200 And they'll still go ahead and translate it, 187 00:08:07,200 --> 00:08:09,690 but this time they might put the wrong amino acid in. 188 00:08:09,690 --> 00:08:11,580 And so the hammer might look a bit different. 189 00:08:11,580 --> 00:08:13,080 It might look like this now. 190 00:08:13,080 --> 00:08:15,659 And that hammer might not work quite as well 191 00:08:15,660 --> 00:08:18,420 as the normal hammer that they should be making. 192 00:08:18,420 --> 00:08:22,110 And actually most of us have got a few mutations like that. 193 00:08:22,110 --> 00:08:25,770 So there'll be a few proteins in your body and in my body 194 00:08:25,770 --> 00:08:28,650 that are a little bit suboptimal. 195 00:08:28,650 --> 00:08:32,189 But for some people, those changes are much more serious, 196 00:08:32,190 --> 00:08:35,730 and that can lead to something called a genetic disorder. 197 00:08:35,730 --> 00:08:38,820 And examples of those are things like cystic fibrosis, 198 00:08:38,820 --> 00:08:41,460 which affects a protein that's very important 199 00:08:41,460 --> 00:08:43,200 in the functioning of lungs, 200 00:08:43,200 --> 00:08:44,970 or sickle cell disease, 201 00:08:44,970 --> 00:08:47,430 which affects the protein called haemoglobin 202 00:08:47,430 --> 00:08:49,652 that transports oxygen around the body. 203 00:08:51,030 --> 00:08:54,030 So genetic disorders can be mild 204 00:08:54,030 --> 00:08:55,770 and they can be very serious, 205 00:08:55,770 --> 00:08:57,840 and they're all down to changes 206 00:08:57,840 --> 00:09:00,930 in those DNA letters in the genome. 207 00:09:00,930 --> 00:09:02,579 And that's a little bit of the problem 208 00:09:02,580 --> 00:09:04,890 with this information transfer process. 209 00:09:04,890 --> 00:09:07,620 It only flows one way. 210 00:09:07,620 --> 00:09:10,770 The ribosomes can't try out different proteins. 211 00:09:10,770 --> 00:09:13,260 They can't send feedback to the genome 212 00:09:13,260 --> 00:09:14,819 and say, well, this hammer's not quite right, 213 00:09:14,820 --> 00:09:16,110 thanks very much. 214 00:09:16,110 --> 00:09:20,070 Information flows one way through cells from the genome 215 00:09:20,070 --> 00:09:24,780 to the RNA messages, to the ribosomes, and that's it. 216 00:09:24,780 --> 00:09:27,839 So we might think, well, that seems a bit terrible. 217 00:09:27,840 --> 00:09:29,610 Why do we have genetic disorders? 218 00:09:29,610 --> 00:09:31,560 Why do we have mutations? 219 00:09:31,560 --> 00:09:32,392 But of course, 220 00:09:32,393 --> 00:09:35,703 mutations are absolutely crucial for evolution. 221 00:09:36,780 --> 00:09:38,220 Organisms look different 222 00:09:38,220 --> 00:09:40,530 because their genomes are different. 223 00:09:40,530 --> 00:09:41,939 So if an organism 224 00:09:41,940 --> 00:09:44,700 is going to change through time and evolve, 225 00:09:44,700 --> 00:09:46,950 then its genome has to change. 226 00:09:46,950 --> 00:09:48,810 And the only way its genome can change 227 00:09:48,810 --> 00:09:51,900 is through this process of mutation. 228 00:09:51,900 --> 00:09:54,000 Now, most mutations, as we've seen, 229 00:09:54,000 --> 00:09:55,350 are going to be harmful 230 00:09:55,350 --> 00:09:57,510 because you are a very well-oiled machine, 231 00:09:57,510 --> 00:09:59,130 and some random change 232 00:09:59,130 --> 00:10:02,070 is unlikely to make you function any better. 233 00:10:02,070 --> 00:10:04,410 But that's not to say that it can't happen. 234 00:10:04,410 --> 00:10:06,000 Sometimes, for example, 235 00:10:06,000 --> 00:10:07,490 there might be a change in the genome 236 00:10:07,490 --> 00:10:09,510 in the instruction for building a hammer 237 00:10:09,510 --> 00:10:11,040 that makes a hammer like this 238 00:10:11,040 --> 00:10:13,949 which is much better than the original hammer. 239 00:10:13,950 --> 00:10:15,060 And if that happens, 240 00:10:15,060 --> 00:10:17,790 then that individual is going to be more successful 241 00:10:17,790 --> 00:10:19,829 perhaps than those around it. 242 00:10:19,830 --> 00:10:21,810 So what we'll see in the next episode 243 00:10:21,810 --> 00:10:25,020 is exactly how evolution works. 244 00:10:25,020 --> 00:10:26,730 So I hope you enjoyed that video, 245 00:10:26,730 --> 00:10:29,820 and if you did, then please do share it with friends 246 00:10:29,820 --> 00:10:32,910 and colleagues who you think might also enjoy it. 247 00:10:32,910 --> 00:10:34,770 There's also the book itself, of course, 248 00:10:34,770 --> 00:10:36,210 and there's a link below 249 00:10:36,210 --> 00:10:38,550 if you'd like to buy it and have your own copy. 250 00:10:38,550 --> 00:10:40,979 There's a lot more depth and detail in the book 251 00:10:40,980 --> 00:10:42,750 on this topic and on others. 252 00:10:42,750 --> 00:10:44,760 So for example, in chapter one, 253 00:10:44,760 --> 00:10:47,310 there's a whole load of stuff about the origins of life 254 00:10:47,310 --> 00:10:50,099 and how understanding information flow in cells 255 00:10:50,100 --> 00:10:53,370 can help us understand the origins of life better. 256 00:10:53,370 --> 00:10:55,710 We're also planning to make more in this series. 257 00:10:55,710 --> 00:10:57,390 So look out for the next videos. 258 00:10:57,390 --> 00:10:59,280 We're hoping to make one for each chapter. 259 00:10:59,280 --> 00:11:01,953 And the next one coming up is all about evolution. 260 00:11:03,210 --> 00:11:05,960 (birds chirping)